Basic Information
Locus ID:
Pt_Chr0405784
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 197960934 | 197963860 | - | Pt_Chr0405784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 88,870.56 Da | 52.27 | 70.94 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 19 | 157 | 4.7129E-63 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 479 | 734 | 2.6E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 20 | 133 | 5.1E-7 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 143 | 7.95E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 737 | 1.37E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 448 | 548 | 3.4E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 154 | 1.3E-8 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 754 | 3.2E-48 | - |
| SMART | SM00220 | serkin_6 | 476 | 742 | 2.5E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 476 | 742 | 35.947723 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 597 | 609 | - | IPR008271 |
| Coils | Coil | Coil | 369 | 394 | - | - |
| Coils | Coil | Coil | 403 | 448 | - | - |
| Coils | Coil | Coil | 343 | 363 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_047063193.1 | U-box domain-containing protein 52-like [Lolium rigidum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | F2EFI6 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology