Basic Information
Locus ID:
Pt_Chr0405582
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 192340363 | 192344048 | + | Pt_Chr0405582 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 106,200.48 Da | 40.13 | 99.29 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 76 | 2.4E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 697 | 982 | 8.5E-45 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 585 | 603 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 420 | 478 | 3.0E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 491 | 599 | 1.33E-21 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 83 | 267 | 6.8E-34 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 203 | 507 | 4.99E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 984 | 1.19E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 351 | 608 | 2.1E-67 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 788 | 7.0E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 1000 | 1.7E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 105 | 340 | 7.1E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 104 | 2.2E-8 | IPR032675 |
| SMART | SM00220 | serkin_6 | 692 | 984 | 1.2E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 562 | 585 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 0.69 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 34.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 988 | 37.021904 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 698 | 721 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 748 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_051201256.1 | leucine-rich repeat receptor-like protein kinase TDR [Lolium perenne] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RK14 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology