Basic Information
Locus ID:
Pt_Chr0404874
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 171851976 | 171857913 | - | Pt_Chr0404874 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 38,743.39 Da | 43.16 | 75.73 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 183 | 339 | 1.8E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 156 | 338 | 2.29E-45 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 169 | 259 | 1.1E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 269 | 341 | 5.2E-19 | - |
| SMART | SM00220 | serkin_6 | 183 | 344 | 9.4E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 183 | 344 | 29.262339 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 189 | 212 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 296 | 308 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 100 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50000.1 | casein kinase II, alpha chain 2. casein kinase II catalytic subunit alpha | 0 |
| RefSeq | XP_037425913.1 | casein kinase II subunit alpha-2-like [Triticum dicoccoides] | 0 |
| P28523 | Casein kinase II subunit alpha OS=Zea mays OX=4577 GN=ACK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0GIR1 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology