Basic Information
Locus ID:
Pt_Chr0404751
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 169139425 | 169140180 | + | Pt_Chr0404751 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.56 | 23,020.64 Da | 41.04 | 98.48 | 0.00 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051189974.1 | uncharacterized protein LOC127303264 [Lolium perenne] | 0 |
| TrEMBL | Q7XNY0 | OSJNBa0035M09.1 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0035M09.1 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah013714, Ah029388 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.2341s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g24170 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9582 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.903 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00018796 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0404751, Pt_Chr0506121 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G000570, Chr11G006120 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G720900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG070380 |
| Poaceae | Triticum aestivum | 2 | TraesCS1A02G213200.1.cds1, TraesCS3A02G125000.1.cds1 |