Basic Information
Locus ID:
Pt_Chr0404489
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 163150408 | 163169851 | - | Pt_Chr0404489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.42 | 168,253.98 Da | 40.38 | 81.87 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 941 | 979 | 2.46166E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 1051 | 1316 | 3.1E-42 | IPR000719 |
| Pfam | PF00854 | POT family | 121 | 560 | 5.5E-87 | IPR000109 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 669 | 733 | 2.5E-9 | IPR025287 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 41 | 613 | 2.62E-25 | IPR036259 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1033 | 1316 | 5.4E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1126 | 1326 | 6.1E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1023 | 1125 | 2.7E-27 | - |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 24 | 613 | 3.4E-181 | IPR036259 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 893 | 985 | 5.2E-10 | - |
| SMART | SM00181 | egf_5 | 891 | 940 | 31.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 1051 | 1319 | 2.7E-34 | IPR000719 |
| SMART | SM00181 | egf_5 | 944 | 998 | 11.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 941 | 998 | 9.3E-7 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1051 | 1322 | 34.279911 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 941 | 974 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1057 | 1079 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1172 | 1184 | - | IPR008271 |
| ProSitePatterns | PS01022 | PTR2 family proton/oligopeptide symporters signature 1. | 110 | 134 | - | IPR018456 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1438 | 1463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1417 | 1431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1394 | 1463 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68570.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_048572788.1 | wall-associated receptor kinase 5-like [Triticum urartu] | 0 |
| Q9SX20 | Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q9E9 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology