Basic Information
Locus ID:
Pt_Chr0404384
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 160724573 | 160726180 | + | Pt_Chr0404384 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 60,024.89 Da | 51.48 | 92.26 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 48 | 2.49E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 190 | 383 | 4.71E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 428 | 6.3E-9 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 85 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00320.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051202422.1 | F-box/LRR-repeat protein At4g14103-like [Lolium perenne] | 0 |
| P0C2G6 | Putative F-box/LRR-repeat protein At4g00320 OS=Arabidopsis thaliana OX=3702 GN=At4g00320 PE=4 SV=1 | 0 | |
| TrEMBL | A0A1E5VD72 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0015975 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology