Basic Information
Locus ID:
Pt_Chr0404354
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 159439949 | 159442221 | - | Pt_Chr0404354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 71,593.38 Da | 43.40 | 89.45 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 274 | 306 | 1.85796E-8 | - |
| Pfam | PF00069 | Protein kinase domain | 385 | 642 | 2.5E-43 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 274 | 315 | 8.2E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 36 | 71 | 5.6E-8 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 273 | 309 | 7.04E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 646 | 2.83E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 456 | 1.3E-19 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 161 | 320 | 4.2E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 654 | 4.3E-50 | - |
| SMART | SM00220 | serkin_6 | 382 | 649 | 5.6E-29 | IPR000719 |
| SMART | SM00179 | egfca_6 | 274 | 316 | 1.1E-7 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 274 | 311 | 9.083276 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 382 | 649 | 34.279911 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 388 | 410 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 290 | 301 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 274 | 299 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 501 | 513 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_044452676.1 | wall-associated receptor kinase 2-like [Triticum aestivum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ASS3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology