Basic Information
Locus ID:
Pt_Chr0404319
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 158612917 | 158617874 | + | Pt_Chr0404319 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 52,913.35 Da | 39.34 | 105.00 | 0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 27 | 384 | 5.4E-46 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 144 | 196 | 1.2E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 83 | 94 | 2.1E-8 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 152 | 162 | 2.1E-8 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 112 | 120 | 2.1E-8 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 97 | 111 | 2.1E-8 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_047044208.1 | sodium/hydrogen exchanger 4-like [Lolium rigidum] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453REW8 | Na_H_Exchanger domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology