Basic Information
Locus ID:
Pt_Chr0404015
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 147820409 | 147824125 | + | Pt_Chr0404015 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 76,158.91 Da | 45.55 | 85.28 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 362 | 656 | 2.28736E-117 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 331 | 641 | 1.0E-87 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 363 | 667 | 3.37E-66 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 365 | 661 | 2.6E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 138 | - | - |
| Coils | Coil | Coil | 293 | 313 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_047044296.1 | probable galacturonosyltransferase 4 [Lolium rigidum] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6TPE1 | Hexosyltransferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology