Basic Information
Locus ID:
Pt_Chr0403966
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 146617984 | 146619084 | + | Pt_Chr0403966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 37,523.79 Da | 46.08 | 84.34 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 172 | 229 | 4.8E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 164 | 276 | 4.71E-20 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 277 | 341 | 1.7E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 157 | 273 | 2.6E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 180 | 310 | 1.1E-8 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 180 | 228 | 11.874514 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 116 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051211668.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4V6D5R0 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G222500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology