Basic Information
Locus ID:
Pt_Chr0403756
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 138976864 | 138979629 | - | Pt_Chr0403756 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 81,613.25 Da | 44.41 | 84.11 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 143 | 203 | 5.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 91 | 1.3E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 454 | 726 | 1.3E-21 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 236 | 5.44E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 453 | 731 | 6.18E-39 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 163 | 3.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 517 | 8.4E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 518 | 754 | 3.6E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 164 | 257 | 6.5E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 750 | 20.85261 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 287 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_051203183.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Lolium perenne] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SHG8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology