Basic Information
Locus ID:
Pt_Chr0403738
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 138372145 | 138379769 | - | Pt_Chr0403738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 72,876.89 Da | 45.68 | 90.99 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 148 | 259 | 4.65461E-45 | - |
| CDD | cd00121 | MATH | 22 | 131 | 4.64997E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 151 | 259 | 1.2E-23 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 464 | 575 | 8.4E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 451 | 577 | 3.53E-30 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 137 | 261 | 7.46E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 136 | 2.45E-23 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 263 | 333 | 5.5E-13 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 579 | 643 | 2.5E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 449 | 573 | 8.7E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 8 | 135 | 2.2E-21 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 136 | 257 | 1.6E-34 | IPR011333 |
| SMART | SM00225 | BTB_4 | 473 | 579 | 3.4E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 159 | 263 | 1.6E-17 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 8 | 130 | 11.083644 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 159 | 226 | 16.838194 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 473 | 540 | 17.872293 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037456635.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T184 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology