Basic Information
Locus ID:
Pt_Chr0403468
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BAG family molecular chaperone regulator
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 127459773 | 127461452 | + | Pt_Chr0403468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 34,779.09 Da | 55.14 | 71.63 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 58 | 125 | 5.3E-7 | IPR000626 |
| Pfam | PF02179 | BAG domain | 153 | 228 | 9.8E-10 | IPR003103 |
| SUPERFAMILY | SSF63491 | BAG domain | 111 | 234 | 2.88E-18 | IPR036533 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 46 | 129 | 8.91E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 57 | 127 | 2.0E-19 | - |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 128 | 234 | 7.1E-32 | IPR036533 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 58 | 126 | 10.658268 | IPR000626 |
| ProSiteProfiles | PS51035 | BAG domain profile. | 148 | 230 | 9.263329 | IPR003103 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 313 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52060.1 | BCL-2-associated athanogene 1. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_044959722.1 | BAG family molecular chaperone regulator 1 [Hordeum vulgare subsp. vulgare] | 0 |
| Q0WUQ1 | BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6YCP1 | Ubiquitin-like domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology