Basic Information
Locus ID:
Pt_Chr0403309
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 121036528 | 121038001 | + | Pt_Chr0403309 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 45,692.68 Da | 41.36 | 77.43 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07734 | F-box associated | 216 | 302 | 3.3E-6 | IPR006527 |
| Pfam | PF00646 | F-box domain | 19 | 50 | 1.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 51 | 3.66E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 60 | 2.6E-7 | - |
| SMART | SM00256 | fbox_2 | 19 | 57 | 0.0035 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 101 | 306 | 1.0E-21 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051207877.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| TrEMBL | I1I865 | F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g39130v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology