Basic Information
Locus ID:
Pt_Chr0403242
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 117267032 | 117269060 | + | Pt_Chr0403242 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 68,221.09 Da | 39.79 | 100.61 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 173 | 191 | 0.63 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 356 | 620 | 5.9E-24 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 69 | 4.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 89 | 136 | 1.7E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 218 | 5.67E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 356 | 621 | 1.31E-44 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 230 | 1.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 349 | 427 | 1.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 640 | 2.2E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 627 | 26.152859 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 381 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17840.1 | receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. | 0 |
| RefSeq | XP_047073178.1 | probable inactive receptor kinase RLK902 [Lolium rigidum] | 0 |
| Q9LVI6 | Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana OX=3702 GN=RLK902 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6THD6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology