Basic Information
Locus ID:
Pt_Chr0403186
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 114707888 | 114711893 | + | Pt_Chr0403186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 65,956.51 Da | 41.02 | 99.83 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 338 | 517 | 2.4E-28 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 5 | 203 | 2.6E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 211 | 2.97E-57 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 564 | 3.69E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 408 | 577 | 8.4E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 338 | 407 | 7.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 278 | 2.5E-58 | - |
| SMART | SM00220 | serkin_6 | 3 | 270 | 9.1E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 332 | 565 | 7.9E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 247 | 28.386032 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 332 | 578 | 23.212988 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 114 | 126 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_044400364.1 | uncharacterized protein LOC123123805 [Triticum aestivum] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LYM9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_059949, gene-QYE76_060141 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106490, Pt_Chr0403186 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG080230 |
| Poaceae | Triticum aestivum | 4 | TraesCS4A02G334900.1, TraesCS4A02G335000.1 ... |