Basic Information
Locus ID:
Pt_Chr0402993
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 97409539 | 97418076 | + | Pt_Chr0402993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 53,498.48 Da | 54.38 | 100.60 | -0.03 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18780.3 | - | 0 |
| RefSeq | XP_003573659.2 | F-box protein At5g03100 isoform X2 [Brachypodium distachyon] | 0 |
| Q56YH2 | FBD-associated F-box protein At5g18780 OS=Arabidopsis thaliana OX=3702 GN=At5g18780 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0Q3HR01 | F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100844189 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH08.1029 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0725660.1 |
| Poaceae | Oryza coarctata | 1 | Oco16G005360 |
| Poaceae | Oryza sativa | 4 | LOC_Os08g09700.1, LOC_Os08g18000.1, LOC_Os08g28940.1 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402993 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC7AG056870, gene_TRIDC7AG056910 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G408500.3, TraesCS7B02G308200.1 ... |