Basic Information
Locus ID:
Pt_Chr0402870
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 86807783 | 86811505 | + | Pt_Chr0402870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 114,934.50 Da | 42.31 | 97.46 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 504 | 562 | 2.5E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 781 | 1066 | 9.9E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 114 | 160 | 2.6E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 669 | 687 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 780 | 1068 | 1.35E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 527 | 683 | 2.13E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 274 | 567 | 1.87E-64 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 143 | 321 | 5.78E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 237 | 1.6E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 873 | 1084 | 1.9E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 442 | 692 | 1.3E-66 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 305 | 3.3E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 782 | 872 | 7.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 441 | 4.1E-35 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 429 | 453 | 6.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 646 | 669 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 381 | 405 | 0.46 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 390.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 776 | 1068 | 1.2E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1072 | 37.021904 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 921 | 933 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 782 | 805 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 812 | 832 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 816 | 832 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_051201256.1 | leucine-rich repeat receptor-like protein kinase TDR [Lolium perenne] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RK14 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology