Basic Information
Locus ID:
Pt_Chr0402840
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 85628701 | 85634513 | - | Pt_Chr0402840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 16,501.49 Da | 41.14 | 78.23 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00175 | Oxidoreductase NAD-binding domain | 1 | 111 | 5.0E-18 | IPR001433 |
| SUPERFAMILY | SSF52343 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 1 | 147 | 3.4E-45 | IPR039261 |
| Gene3D | G3DSA:3.40.50.80 | - | 1 | 147 | 5.9E-56 | IPR039261 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 96 | 104 | 2.9E-12 | IPR001709 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 73 | 89 | 2.9E-12 | IPR001709 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 29 | 38 | 2.9E-12 | IPR001709 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 42 | 53 | 2.9E-12 | IPR001709 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30210.2 | P450 reductase 2. Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. | 0 |
| RefSeq | XP_047076133.1 | NADPH--cytochrome P450 reductase [Lolium rigidum] | 0 |
| C5YJG8 | NADPH--cytochrome P450 reductase OS=Sorghum bicolor OX=4558 GN=CPR PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9DC22 | NAD_binding_1 domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0657_0010.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14120, gene.Thate08g08970 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032376 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402840 |
| Poaceae | Zea mays | 5 | Zm00001eb010260_P001, Zm00001eb040630_P001 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu32170 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604019 |