Basic Information
Locus ID:
Pt_Chr0402680
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 79808586 | 79811135 | - | Pt_Chr0402680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 90,499.40 Da | 49.43 | 77.39 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 493 | 781 | 1.84028E-86 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 218 | 242 | 1.7E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 488 | 711 | 4.6E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 465 | 781 | 1.62E-70 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 126 | 318 | 2.62E-15 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 571 | 790 | 4.7E-53 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 50 | 393 | 1.2E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 460 | 570 | 6.3E-31 | - |
| SMART | SM00220 | serkin_6 | 487 | 752 | 2.8E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 783 | 38.548378 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 493 | 515 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 621 | 633 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 832 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_051200634.1 | serine/threonine-protein kinase-like protein CCR4 [Lolium perenne] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453S387 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology