Basic Information
Locus ID:
Pt_Chr0402611
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 77442326 | 77445485 | - | Pt_Chr0402611 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 74,252.71 Da | 40.52 | 92.95 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 695 | 4.3E-34 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 73 | 3.7E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 173 | 232 | 2.0E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 695 | 3.03E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 243 | 4.16E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 256 | 1.3E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 699 | 7.7E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 183 | 8.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 497 | 1.3E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 147 | 171 | 39.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 419 | 693 | 8.0E-10 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 218 | 18.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 699 | 27.651064 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 298 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_047079976.1 | LRR receptor kinase BAK1-like [Lolium rigidum] | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6YHK1 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology