Basic Information
Locus ID:
Pt_Chr0402482
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 72701746 | 72708013 | + | Pt_Chr0402482 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 100,165.10 Da | 54.79 | 74.64 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 630 | 887 | 4.81161E-107 | - |
| CDD | cd06410 | PB1_UP2 | 98 | 192 | 2.2405E-38 | - |
| Pfam | PF00564 | PB1 domain | 113 | 192 | 8.5E-12 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 627 | 891 | 7.1E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 613 | 889 | 1.52E-74 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 110 | 198 | 6.47E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 617 | 711 | 2.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 712 | 903 | 5.4E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 116 | 192 | 2.7E-6 | - |
| SMART | SM00220 | serkin_6 | 624 | 891 | 1.2E-51 | IPR000719 |
| SMART | SM00666 | PB1_new | 109 | 194 | 6.4E-21 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 624 | 895 | 41.813332 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 749 | 761 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 818 | 840 | 1.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 743 | 761 | 1.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 862 | 884 | 1.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 706 | 719 | 1.9E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 585 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_047090721.1 | probable serine/threonine-protein kinase SIS8 [Lolium rigidum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | I1H4R2 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g60340v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology