Basic Information
Locus ID:
Pt_Chr0401797
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 51449295 | 51458232 | + | Pt_Chr0401797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 85,345.05 Da | 40.06 | 87.43 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 457 | 722 | 2.36046E-49 | - |
| Pfam | PF00069 | Protein kinase domain | 40 | 260 | 3.2E-48 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 653 | 689 | 0.026 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 612 | 648 | 9.5E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 568 | 604 | 0.049 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 316 | 397 | 3.14E-8 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 303 | 8.77E-70 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 455 | 726 | 5.27E-51 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 311 | 6.0E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 108 | 1.3E-21 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 312 | 432 | 1.0E-11 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 454 | 733 | 6.4E-68 | IPR015943 |
| SMART | SM00320 | WD40_4 | 564 | 604 | 2.7E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 476 | 515 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 519 | 557 | 0.24 | IPR001680 |
| SMART | SM00220 | serkin_6 | 38 | 325 | 6.1E-40 | IPR000719 |
| SMART | SM00320 | WD40_4 | 607 | 648 | 4.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 692 | 731 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 651 | 689 | 5.1E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 571 | 613 | 10.207686 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 614 | 657 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 306 | 36.315205 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 571 | 607 | 8.518333 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 657 | 698 | 8.67045 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 614 | 650 | 11.049229 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 65 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 635 | 649 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23320.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 24. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037466356.1 | uncharacterized protein LOC119338162 [Triticum dicoccoides] | 0 |
| Q9C5S9 | Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FV36 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology