Basic Information
Locus ID:
Pt_Chr0401772
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
cell redox homeostasis
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 50724571 | 50733706 | + | Pt_Chr0401772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 86,667.71 Da | 45.94 | 90.24 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 40 | 256 | 8.1E-49 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 607 | 645 | 0.001 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 653 | 689 | 4.9E-4 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 315 | 408 | 5.23E-8 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 303 | 2.8E-69 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 533 | 730 | 9.73E-39 | IPR036322 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 314 | 442 | 4.0E-13 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 498 | 750 | 1.5E-55 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 311 | 8.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 110 | 2.8E-21 | - |
| SMART | SM00320 | WD40_4 | 563 | 601 | 0.053 | IPR001680 |
| SMART | SM00320 | WD40_4 | 605 | 645 | 6.2E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 521 | 559 | 9.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 648 | 689 | 2.2E-6 | IPR001680 |
| SMART | SM00220 | serkin_6 | 38 | 325 | 4.8E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 306 | 36.2304 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 655 | 691 | 9.019239 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 318 | 439 | 9.79462 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 612 | 648 | 10.521959 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 612 | 654 | 12.881143 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 655 | 698 | 12.145943 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 65 | - | IPR017441 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 676 | 690 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_037466356.1 | uncharacterized protein LOC119338162 [Triticum dicoccoides] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I6WP81 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology