Basic Information
Locus ID:
Pt_Chr0401758
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 50423915 | 50438964 | + | Pt_Chr0401758 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 75,909.80 Da | 45.99 | 90.85 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 41 | 259 | 6.9E-48 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 531 | 567 | 0.0042 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 572 | 608 | 0.01 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 312 | 394 | 4.71E-7 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 304 | 8.36E-68 | IPR011009 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 467 | 647 | 7.85E-29 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 449 | 665 | 1.1E-28 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 111 | 1.3E-21 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 315 | 448 | 3.4E-10 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 312 | 1.0E-45 | - |
| SMART | SM00320 | WD40_4 | 611 | 653 | 180.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 526 | 567 | 8.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 570 | 608 | 7.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 450 | 494 | 3.7 | IPR001680 |
| SMART | SM00220 | serkin_6 | 39 | 326 | 1.3E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 307 | 35.410629 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 576 | 617 | 9.205141 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 533 | 569 | 9.941962 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 533 | 576 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 319 | 446 | 11.718 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 45 | 66 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 554 | 568 | - | IPR019775 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23320.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 24. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037466356.1 | uncharacterized protein LOC119338162 [Triticum dicoccoides] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8I6WP81 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology