Basic Information
Locus ID:
Pt_Chr0401730
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 49508057 | 49511823 | - | Pt_Chr0401730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 106,784.51 Da | 40.99 | 102.60 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 714 | 988 | 3.3E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 68 | 1.2E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 122 | 135 | 0.36 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 299 | 321 | 0.83 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 585 | 599 | 1.3 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 389 | 625 | 6.46E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 171 | 1.67E-12 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 148 | 459 | 7.48E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 709 | 990 | 2.87E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 788 | 1008 | 2.4E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 235 | 3.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 143 | 2.0E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 683 | 787 | 1.4E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 634 | 7.3E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 236 | 340 | 3.6E-33 | IPR032675 |
| SMART | SM00220 | serkin_6 | 712 | 995 | 2.2E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 200 | 228 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 512 | 536 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 321 | 343 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 8.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 146 | 95.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 488 | 511 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 560 | 584 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 320 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 995 | 37.036041 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 832 | 844 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_047056353.1 | leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 [Lolium rigidum] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7R8K1 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology