Basic Information
Locus ID:
Pt_Chr0401704
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 48832700 | 48836877 | + | Pt_Chr0401704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 106,739.66 Da | 39.43 | 105.30 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 124 | 137 | 0.57 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 301 | 323 | 0.82 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 252 | 266 | 1.4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 587 | 601 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 70 | 2.4E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 713 | 987 | 4.3E-39 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 196 | 3.81E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 151 | 461 | 2.41E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 708 | 989 | 2.87E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 397 | 628 | 1.04E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 143 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 638 | 9.7E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 682 | 786 | 1.4E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 237 | 1.9E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 342 | 9.5E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 1004 | 7.6E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 490 | 513 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 299 | 322 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 514 | 538 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 711 | 994 | 2.7E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 586 | 609 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 323 | 345 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 148 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 347 | 371 | 8.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 42.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 711 | 994 | 37.036041 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_047056353.1 | leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 [Lolium rigidum] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3H160 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100827326 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology