Basic Information
Locus ID:
Pt_Chr0401681
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
CUE domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 48215882 | 48219083 | - | Pt_Chr0401681 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 29,865.99 Da | 62.13 | 70.33 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 51 | 87 | 7.25853E-10 | - |
| Pfam | PF02845 | CUE domain | 51 | 90 | 9.6E-7 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 46 | 93 | 3.32E-8 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 44 | 95 | 3.7E-6 | - |
| SMART | SM00546 | cue_7 | 49 | 91 | 2.3E-4 | IPR003892 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 49 | 92 | 13.808876 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 135 | - | - |
| Coils | Coil | Coil | 218 | 245 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.3 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_051202819.1 | uncharacterized protein LOC127316462 [Lolium perenne] | 0 |
| TrEMBL | I1GVE0 | CUE domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100830187 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology