Basic Information
Locus ID:
Pt_Chr0401594
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 46274515 | 46281279 | + | Pt_Chr0401594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 43,608.74 Da | 52.09 | 88.61 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 21 | 57 | 1.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 68 | 1.57E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 62 | 2.3E-6 | - |
| SMART | SM00256 | fbox_2 | 21 | 62 | 2.3E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 65 | 9.391492 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044958139.1 | uncharacterized protein LOC123409254 [Hordeum vulgare subsp. vulgare] | 0 |
| TrEMBL | A0A8I6YHL2 | F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology