Basic Information
Locus ID:
Pt_Chr0401573
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 45909184 | 45933067 | - | Pt_Chr0401573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 189,188.11 Da | 52.67 | 82.53 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 498 | 537 | 8.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 1305 | 1364 | 8.5E-10 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 76 | 141 | 9.42E-9 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 494 | 553 | 4.45E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 491 | 540 | 1.6E-6 | - |
| SMART | SM00256 | fbox_2 | 1310 | 1351 | 0.0011 | IPR001810 |
| SMART | SM00256 | fbox_2 | 88 | 129 | 0.046 | IPR001810 |
| SMART | SM00256 | fbox_2 | 499 | 540 | 3.0E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 493 | 543 | 11.060639 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1304 | 1354 | 9.709425 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 82 | 132 | 9.073559 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1283 | 1302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1122 | 1158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 938 | 967 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1253 | 1268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 947 | 965 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1243 | 1268 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051207689.1 | uncharacterized protein LOC127323613 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6TY89 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology