Basic Information
Locus ID:
Pt_Chr0401389
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 40363298 | 40363546 | + | Pt_Chr0401389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 9,052.18 Da | 57.02 | 73.78 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 63 | 1.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 82 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_047057922.1 | L-type lectin-domain containing receptor kinase IX.2-like [Lolium rigidum] | 0 |
| Q9M345 | L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7QNL1 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0547130.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049292 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g06210.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401389 |