Basic Information
Locus ID:
Pt_Chr0401365
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 39857963 | 39863992 | - | Pt_Chr0401365 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 93,940.09 Da | 38.53 | 88.77 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 199 | 446 | 2.06152E-122 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 197 | 446 | 2.0E-67 | IPR001245 |
| Pfam | PF03381 | LEM3 (ligand-effect modulator 3) family / CDC50 family | 534 | 799 | 3.5E-90 | IPR005045 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 170 | 446 | 2.43E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 463 | 1.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 180 | 274 | 5.6E-24 | - |
| SMART | SM00220 | serkin_6 | 192 | 454 | 1.5E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 192 | 454 | 43.042988 | IPR000719 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 373 | 395 | 5.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 354 | 364 | 5.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 270 | 283 | 5.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 417 | 439 | 5.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 308 | 326 | 5.5E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24360.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051198313.1 | serine/threonine-protein kinase STY13-like isoform X7 [Lolium perenne] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RN15 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0307430, Pt_Chr0401365 |