Basic Information
Locus ID:
Pt_Chr0401303
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 37949706 | 37950744 | - | Pt_Chr0401303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 33,992.93 Da | 41.91 | 95.35 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 127 | 241 | 3.14848E-51 | - |
| Pfam | PF00651 | BTB/POZ domain | 132 | 241 | 1.1E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 119 | 242 | 8.44E-33 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 245 | 311 | 3.9E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 117 | 239 | 9.1E-40 | IPR011333 |
| SMART | SM00225 | BTB_4 | 141 | 245 | 2.2E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 141 | 208 | 17.768883 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_020200816.1 | BTB/POZ and MATH domain-containing protein 1-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6TX17 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology