Basic Information
Locus ID:
Pt_Chr0401239
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 35644155 | 35645610 | + | Pt_Chr0401239 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 35,933.83 Da | 44.14 | 88.06 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 51 | 308 | 5.6E-32 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 320 | 5.41E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 323 | 4.4E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 125 | 6.6E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 319 | 23.863152 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18610.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051198572.1 | serine/threonine-protein kinase PBL27-like isoform X2 [Lolium perenne] | 0 |
| Q1PDV6 | Serine/threonine-protein kinase PBL27 OS=Arabidopsis thaliana OX=3702 GN=PBL27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SS99 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_036003, gene-QYE76_036004, gene-QYE76_036008 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401239 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G779800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG064200, gene_TRIDC7BG057970 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G460900.1, TraesCS7B02G362200.1 ... |