Basic Information
Locus ID:
Pt_Chr0401085
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
iron ion homeostasis
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 30383338 | 30384180 | - | Pt_Chr0401085 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 22,974.33 Da | 37.33 | 100.71 | 0.27 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53550.1 | YELLOW STRIPE like 3. | 0 |
| RefSeq | XP_044961132.1 | iron-phytosiderophore transporter YSL15-like isoform X3 [Hordeum vulgare subsp. vulgare] | 0 |
| Q6H3Z3 | Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6YYP6 | Metal-nicotianamine transporter YSL7 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg13844, jg26015 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl63484 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000005520, gene:ENSEOMG00000010196 ... |
| Apiaceae | Apium graveolens | 2 | Ag4G02544, Ag7G00185 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G010280 |
| Brassicaceae | Brassica nigra | 1 | BniB08g055460.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g21630 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1687 |
| Plantaginaceae | Plantago ovata | 4 | Pov_00002521, Pov_00010257, Pov_00019805, Pov_00019807 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G22795 |
| Poaceae | Echinochloa crus-galli | 2 | AH07.2820, BH04.564 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0584800.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_015718 |
| Poaceae | Oryza coarctata | 2 | Oco07G011050, Oco07G011940 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0306987, Pt_Chr0401085, Pt_Chr0704648 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G008410, Chr23G008420, Chr25G012580 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G303300, Tel2E01G508600, Tel2E01G509400 ... |
| Poaceae | Zea mays | 3 | Zm00001eb024050_P001, Zm00001eb158590_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-22426, nbis-gene-37120, nbis-gene-9312 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14015 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17104 |
| Salicaceae | Populus euphratica | 1 | populus_peu24607 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132643916 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G1334 |