halophFGD

Basic Information

Locus ID: Pt_Chr0400941

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: SAD/SRA domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr04	26727722	26727976	-	Pt_Chr0400941

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.85	8,790.55 Da	43.28	49.88	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03478	Protein of unknown function (DUF295)	2	54	2.1E-10	IPR005174

KEGG Pathway

KO Term:

K11420 ([histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355])

Pathway:

ko00310 (Lysine degradation) map00310 (Lysine degradation) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway)

Reaction:

R03875 (Protein lysine + S-Adenosyl-L-methionine <=> Protein N6-methyl-L-lysine + S-Adenosyl-L-homocysteine) R03938 (S-Adenosyl-L-methionine + Histone-L-lysine <=> S-Adenosyl-L-homocysteine + Histone N6-methyl-L-lysine) R04866 (S-Adenosyl-L-methionine + Protein N6-methyl-L-lysine <=> S-Adenosyl-L-homocysteine + Protein N6,N6-dimethyl-L-lysine) R04867 (S-Adenosyl-L-methionine + Protein N6,N6-dimethyl-L-lysine <=> S-Adenosyl-L-homocysteine + Protein N6,N6,N6-trimethyl-L-lysine)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_048560637.1	uncharacterized protein LOC125541217, partial [Triticum urartu]	0
TrEMBL	A0A8R7TET2	DUF295 domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.2HG0105960.1.CDS1 ... HORVU.MOREX.r3.2HG0190420.1.CDS1, HORVU.MOREX.r3.3HG0225870.1, HORVU.MOREX.r3.3HG0312970.1.CDS1, HORVU.MOREX.r3.3HG0327240.1.CDS1, HORVU.MOREX.r3.7HG0712730.1.CDS1
Poaceae	Lolium multiflorum	23	gene-QYE76_005955, gene-QYE76_007209, gene-QYE76_007223 ... gene-QYE76_007226, gene-QYE76_018533, gene-QYE76_021062, gene-QYE76_049470, gene-QYE76_049475, gene-QYE76_050553, gene-QYE76_058532, gene-QYE76_058536, gene-QYE76_058604, gene-QYE76_058605, gene-QYE76_058607, gene-QYE76_058608, gene-QYE76_058721, gene-QYE76_058733, gene-QYE76_059049, gene-QYE76_060355, gene-QYE76_060357, gene-QYE76_060361, gene-QYE76_063937, gene-QYE76_064483
Poaceae	Oryza coarctata	1	Oco01G030920
Poaceae	Puccinellia tenuiflora	29	Pt_Chr0106145, Pt_Chr0106146, Pt_Chr0106147, Pt_Chr0106148 ... Pt_Chr0200552, Pt_Chr0203187, Pt_Chr0304372, Pt_Chr0304446, Pt_Chr0305615, Pt_Chr0305834, Pt_Chr0306377, Pt_Chr0400941, Pt_Chr0400942, Pt_Chr0601068, Pt_Chr0604813, Pt_Chr0604814, Pt_Chr0604815, Pt_Chr0700799, Pt_Chr0700801, Pt_Chr0700802, Pt_Chr0700828, Pt_Chr0700829, Pt_Chr0700830, Pt_Chr0700831, Pt_Chr0700835, Pt_Chr0700836, Pt_Chr0700948, Pt_Chr0702459, Pt_Chr0702460
Poaceae	Thinopyrum elongatum	5	Tel2E01G714100, Tel3E01G083700, Tel3E01G849800 ... Tel3E01G867800, Tel3E01G878500
Poaceae	Triticum dicoccoides	16	gene_TRIDC2AG006540, gene_TRIDC2BG007550 ... gene_TRIDC2BG007590, gene_TRIDC3AG004030, gene_TRIDC3AG073700, gene_TRIDC3BG006260, gene_TRIDC3BG084420, gene_TRIDC3BG084430, gene_TRIDC3BG084570, gene_TRIDC3BG084730, gene_TRIDC3BG085440, gene_TRIDC3BG086230, gene_TRIDC5BG077300, gene_TRIDC5BG077310, gene_TRIDC6BG073050, gene_TRIDC7AG026340
Poaceae	Triticum aestivum	22	TraesCS2A02G419700.1.cds1, TraesCS2B02G438800.1.cds1 ... TraesCS2D02G058800.1.cds1, TraesCS2D02G357300.1, TraesCS2D02G416800.1.cds1, TraesCS2D02G416900.1.cds1, TraesCS3A02G037100.1, TraesCS3A02G520800.1.cds1, TraesCS3B02G012400.1.cds1, TraesCS3B02G046800.2, TraesCS3B02G585200.1.cds1, TraesCS3B02G590100.1.cds1, TraesCS3B02G591200.1.cds1, TraesCS3D02G042600.1, TraesCS3D02G440800.1, TraesCS3D02G528700.1.cds1, TraesCS4A02G354400.1.cds1, TraesCS5B02G518000.1.cds1, TraesCS6B02G461100.1.cds1, TraesCS6D02G010700.1.cds1, TraesCSU02G154000.1.cds1, TraesCSU02G202400.1.cds1