Basic Information
Locus ID:
Pt_Chr0400441
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 12154875 | 12158319 | + | Pt_Chr0400441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 112,160.83 Da | 42.42 | 92.36 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 694 | 977 | 4.89023E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.3E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 553 | 575 | 0.08 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 95 | 134 | 2.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 293 | 315 | 0.57 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 690 | 974 | 8.6E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 976 | 5.8E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 381 | 3.4E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 350 | 607 | 8.5E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 265 | 4.8E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 211 | 9.4E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 778 | 3.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 337 | 5.9E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 779 | 993 | 8.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 622 | 7.0E-61 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 292 | 315 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 526 | 550 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 574 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 688 | 982 | 1.2E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 51.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 976 | 37.276318 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 551 | 564 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 294 | 307 | 1.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1023 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_051199650.1 | receptor-like protein kinase 5 [Lolium perenne] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7V9D8 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology