Basic Information
Locus ID:
Pt_Chr0400116
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 3886286 | 3891980 | - | Pt_Chr0400116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 60,867.62 Da | 50.74 | 76.69 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 138 | 212 | 1.18093E-13 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 248 | 345 | 2.5E-8 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 131 | 226 | 9.9E-15 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 425 | 538 | 1.37E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 138 | 226 | 1.65E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 106 | 262 | 1.7E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 263 | 367 | 2.4E-12 | - |
| SMART | SM00875 | BACK_2 | 244 | 346 | 6.3E-5 | IPR011705 |
| SMART | SM00225 | BTB_4 | 131 | 229 | 5.6E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 123 | 198 | 13.673847 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 124 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_044962279.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I7BES7 | BTB domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology