Basic Information
Locus ID:
Pt_Chr0307430
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 227957491 | 227963361 | - | Pt_Chr0307430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 91,598.61 Da | 42.48 | 79.38 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 153 | 400 | 3.01114E-123 | - |
| Pfam | PF03381 | LEM3 (ligand-effect modulator 3) family / CDC50 family | 539 | 804 | 5.1E-90 | IPR005045 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 151 | 400 | 1.9E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 124 | 400 | 2.16E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 229 | 464 | 4.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 134 | 228 | 5.4E-24 | - |
| SMART | SM00220 | serkin_6 | 146 | 408 | 1.5E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 146 | 408 | 43.042988 | IPR000719 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 224 | 237 | 4.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 308 | 318 | 4.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 371 | 393 | 4.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 262 | 280 | 4.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 327 | 349 | 4.7E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 500 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24360.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051198313.1 | serine/threonine-protein kinase STY13-like isoform X7 [Lolium perenne] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RN15 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0307430, Pt_Chr0401365 |