Basic Information
Locus ID:
Pt_Chr0307417
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 227624095 | 227629134 | - | Pt_Chr0307417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 68,738.89 Da | 59.40 | 80.73 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 315 | 522 | 2.4E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 293 | 578 | 5.66E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 388 | 1.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 390 | 588 | 3.0E-56 | - |
| SMART | SM00220 | serkin_6 | 312 | 578 | 3.2E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 312 | 585 | 33.912426 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 432 | 444 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 318 | 340 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 199 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047088193.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Lolium rigidum] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | F2E5M2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology