Basic Information
Locus ID:
Pt_Chr0307145
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 219795366 | 219803904 | + | Pt_Chr0307145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 72,140.14 Da | 39.44 | 86.15 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02135 | TAZ zinc finger | 519 | 594 | 5.4E-7 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 14 | 119 | 6.3E-10 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 206 | 284 | 3.4E-8 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 119 | 1.49E-9 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 199 | 288 | 7.72E-13 | IPR035898 |
| SUPERFAMILY | SSF57933 | TAZ domain | 510 | 601 | 4.71E-13 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 193 | 313 | 5.1E-17 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 504 | 628 | 7.1E-15 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 11 | 161 | 6.4E-21 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 349 | 473 | 2.4E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 15 | 122 | 6.8E-9 | IPR000210 |
| SMART | SM00225 | BTB_4 | 334 | 434 | 14.0 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 510 | 595 | 2.6E-6 | IPR000197 |
| SMART | SM00551 | TAZ_2 | 198 | 285 | 4.8E-7 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 85 | 12.019287 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48360.1 | BTB and TAZ domain protein 2. encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones. | 0 |
| RefSeq | XP_047070944.1 | BTB/POZ and TAZ domain-containing protein 1-like isoform X2 [Lolium rigidum] | 0 |
| Q94BN0 | BTB/POZ and TAZ domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BT2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B0K3 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology