halophFGD

Basic Information

Locus ID: Pt_Chr0306916

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr03	214375373	214379186	+	Pt_Chr0306916

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.20	90,942.95 Da	53.52	82.49	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12274	Protein of unknown function (DUF3615)	693	777	5.4E-9	IPR022059
MobiDBLite	mobidb-lite	consensus disorder prediction	367	382	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	359	382	-	-
Coils	Coil	Coil	68	88	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051226740.1	uncharacterized protein LOC127344485 [Lolium perenne]	0
TrEMBL	A0A3B6ILG8	MYND-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH06.285, BH01.2970, CH02.77, CH03.2854
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_1AG0009100, gene-QOZ80_6BG0489290
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.4HG0337530.1, HORVU.MOREX.r3.5HG0420880.1 ... HORVU.MOREX.r3.5HG0421100.1, HORVU.MOREX.r3.5HG0424710.1
Poaceae	Lolium multiflorum	26	gene-QYE76_005288, gene-QYE76_012829, gene-QYE76_018150 ... gene-QYE76_020556, gene-QYE76_021574, gene-QYE76_021576, gene-QYE76_021579, gene-QYE76_021580, gene-QYE76_037542, gene-QYE76_037543, gene-QYE76_049275, gene-QYE76_058185, gene-QYE76_058221, gene-QYE76_058222, gene-QYE76_058310, gene-QYE76_058315, gene-QYE76_058549, gene-QYE76_058550, gene-QYE76_058714, gene-QYE76_058951, gene-QYE76_058956, gene-QYE76_060503, gene-QYE76_060504, gene-QYE76_063768, gene-QYE76_068541, gene-QYE76_069917
Poaceae	Oryza coarctata	2	Oco05G019240, Oco06G020130
Poaceae	Oryza sativa	4	LOC_Os06g45620.1, LOC_Os11g09820.1, LOC_Os11g09940.1 ... LOC_Os12g09190.1
Poaceae	Paspalum vaginatum	1	gene-BS78_03G033500
Poaceae	Puccinellia tenuiflora	23	Pt_Chr0105698, Pt_Chr0107142, Pt_Chr0108101, Pt_Chr0300838 ... Pt_Chr0300848, Pt_Chr0306893, Pt_Chr0306894, Pt_Chr0306898, Pt_Chr0306911, Pt_Chr0306913, Pt_Chr0306916, Pt_Chr0502520, Pt_Chr0504587, Pt_Chr0605440, Pt_Chr0605443, Pt_Chr0605656, Pt_Chr0605846, Pt_Chr0700748, Pt_Chr0700886, Pt_Chr0703710, Pt_Chr0703935, Pt_Ctg00138, Pt_Ctg00139
Poaceae	Thinopyrum elongatum	3	Tel5E01G027100, Tel6E01G298100, Tel7E01G953600
Poaceae	Triticum dicoccoides	6	gene_TRIDC3BG053520, gene_TRIDC5AG001940 ... gene_TRIDC6BG049490, gene_TRIDC7AG009070, gene_TRIDC7AG016310, gene_TRIDC7BG024580
Poaceae	Triticum aestivum	26	TraesCS2A02G546100.1, TraesCS3B02G357800.1 ... TraesCS3B02G555000.1.cds1, TraesCS4A02G377600.1, TraesCS4A02G377800.1, TraesCS4B02G048200.1, TraesCS4B02G053200.1, TraesCS4D02G048400.1, TraesCS4D02G053500.1, TraesCS5B02G010100.1, TraesCS5B02G291400.1, TraesCS5D02G017200.1, TraesCS6A02G142900.1, TraesCS6B02G305000.1, TraesCS6D02G257600.1, TraesCS7A02G079000.1, TraesCS7A02G079200.1, TraesCS7A02G079900.1, TraesCS7A02G080100.1, TraesCS7A02G080200.1, TraesCS7A02G080300.1, TraesCS7B02G155600.1, TraesCS7B02G310000.1, TraesCS7D02G074300.1, TraesCS7D02G074400.1, TraesCS7D02G403800.1.cds1