Basic Information
Locus ID:
Pt_Chr0306860
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 212490262 | 212495082 | - | Pt_Chr0306860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 89,260.76 Da | 49.31 | 79.40 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 87 | 283 | 6.37687E-96 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 101 | 260 | 5.8E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 265 | 763 | 3.6E-193 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 78 | 293 | 1.57E-60 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 336 | 594 | 2.2E-89 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 615 | 736 | 3.53E-33 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 334 | 506 | 1.3E-73 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 594 | 740 | 5.6E-52 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 507 | 593 | 1.3E-32 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 63 | 307 | 1.3E-87 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 100 | 262 | 3.0E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 59 | 779 | 9.2E-236 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 98 | 107 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 148 | 165 | 1.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 195 | 217 | 1.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 78 | 98 | 1.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 269 | 287 | 1.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 99 | 121 | 1.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 250 | 267 | 1.1E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 166 | 183 | 1.1E-61 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 75 | 737 | 25.954678 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 745 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 764 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_047063702.1 | heat shock protein 90-5, chloroplastic-like [Lolium rigidum] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | I1I838 | HATPase_c domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100825024 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology