Basic Information
Locus ID:
Pt_Chr0306845
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 211878472 | 211884075 | + | Pt_Chr0306845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 78,607.79 Da | 42.99 | 88.06 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 460 | 708 | 1.43434E-123 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 154 | 302 | 5.4E-38 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 454 | 708 | 2.9E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 431 | 707 | 9.98E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 533 | 717 | 2.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 531 | 8.4E-35 | - |
| SMART | SM00220 | serkin_6 | 454 | 716 | 6.0E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 712 | 43.72142 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 460 | 481 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 575 | 587 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 635 | 657 | 7.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 569 | 587 | 7.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 679 | 701 | 7.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 616 | 626 | 7.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 528 | 541 | 7.8E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 100 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_047067625.1 | serine/threonine-protein kinase CTR1-like [Lolium rigidum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CBT1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology