Basic Information
Locus ID:
Pt_Chr0306338
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 194976578 | 194982348 | - | Pt_Chr0306338 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 80,072.76 Da | 37.86 | 83.38 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 77 | 2.1E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 183 | 1.0E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 421 | 700 | 1.2E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 701 | 4.85E-63 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 256 | 5.83E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 494 | 4.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 265 | 1.7E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 726 | 5.9E-54 | - |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 127 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 171 | 2.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 704 | 32.484894 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 151 | 172 | 7.966078 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 277 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_047062710.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like isoform X1 [Lolium rigidum] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | I1GS76 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g21040v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology