Basic Information
Locus ID:
Pt_Chr0306032
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 187072649 | 187074982 | - | Pt_Chr0306032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 81,051.98 Da | 40.85 | 82.38 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 25 | 213 | 3.00745E-110 | - |
| Pfam | PF00183 | Hsp90 protein | 195 | 703 | 1.2E-232 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 38 | 192 | 5.5E-13 | IPR003594 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 273 | 528 | 1.14E-108 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 16 | 224 | 7.63E-75 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 553 | 674 | 8.24E-38 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 441 | 527 | 5.1E-42 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 272 | 440 | 7.3E-85 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 13 | 239 | 3.6E-97 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 528 | 679 | 2.3E-64 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 38 | 176 | 3.9E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 2 | 709 | 9.0E-259 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 36 | 45 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 199 | 217 | 1.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 181 | 198 | 1.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 86 | 103 | 1.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 37 | 59 | 1.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 104 | 121 | 1.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 16 | 36 | 1.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 129 | 151 | 1.1E-83 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 13 | 675 | 27.210999 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 244 | - | - |
| Coils | Coil | Coil | 527 | 547 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_047069347.1 | heat shock protein 90-1 [Lolium rigidum] | 0 |
| Q08277 | Heat shock protein 82 OS=Zea mays OX=4577 GN=HSP82 PE=3 SV=1 | 0 | |
| TrEMBL | F4Y5A7 | Heat shock protein 90 OS=Triticum urartu OX=4572 GN=Hsp90.1-A1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology