Basic Information
Locus ID:
Pt_Chr0305599
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 177642546 | 177650175 | + | Pt_Chr0305599 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 43,805.16 Da | 49.86 | 94.28 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 59 | 279 | 5.49E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 52 | 281 | 1.0E-6 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051213353.1 | FBD-associated F-box protein At4g10400-like [Lolium perenne] | 0 |
| TrEMBL | A0A8I6WKC7 | F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH09.469 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0114340, gene-QOZ80_7AG0567720 |
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.2HG0106580.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 21 | gene-QYE76_018842, gene-QYE76_019819, gene-QYE76_026969 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os04g19750.1, LOC_Os04g19800.1 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0300408, Pt_Chr0300410, Pt_Chr0300436, Pt_Chr0305599 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G009210 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G829000, Tel2E01G830300, Tel2E01G830500 ... |
| Poaceae | Triticum dicoccoides | 9 | gene_TRIDC2AG008370, gene_TRIDC2AG068980 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G489900.1.cds1, TraesCS2B02G090000.1 ... |