Basic Information
Locus ID:
Pt_Chr0305348
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 170947192 | 170954060 | - | Pt_Chr0305348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 134,172.39 Da | 52.76 | 75.72 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 531 | 887 | 1.7E-101 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 170 | 286 | 2.4E-13 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 525 | 921 | 4.32E-114 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 163 | 303 | 1.83E-24 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 467 | 889 | 1.2E-126 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 158 | 286 | 1.7E-26 | IPR036872 |
| SMART | SM00033 | ch_5 | 167 | 284 | 2.2E-8 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 523 | 895 | 4.3E-155 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 165 | 286 | 18.596401 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 525 | 887 | 109.645744 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 757 | 774 | 1.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 600 | 621 | 1.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 837 | 858 | 1.2E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 788 | 806 | 1.2E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1007 | 1210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1025 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 927 | 980 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1057 | 1071 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1072 | 1111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 991 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1162 | 1185 | - | - |
| Coils | Coil | Coil | 505 | 525 | - | - |
| Coils | Coil | Coil | 458 | 485 | - | - |
| Coils | Coil | Coil | 894 | 931 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44730.2 | - | 0 |
| RefSeq | XP_051217755.1 | kinesin-like protein KIN-14F [Lolium perenne] | 0 |
| Q8W1Y3 | Kinesin-like protein KIN-14F OS=Arabidopsis thaliana OX=3702 GN=KIN14F PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D5UN37 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS3316 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology