Basic Information
Locus ID:
Pt_Chr0304944
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 161179829 | 161180911 | + | Pt_Chr0304944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 39,885.47 Da | 42.01 | 92.11 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 174 | 289 | 2.27138E-48 | - |
| CDD | cd00121 | MATH | 18 | 148 | 4.21488E-22 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 180 | 292 | 2.1E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 291 | 1.92E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 155 | 8.67E-27 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 163 | 287 | 5.9E-36 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 292 | 359 | 1.9E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 155 | 1.3E-22 | IPR008974 |
| SMART | SM00225 | BTB_4 | 188 | 293 | 5.6E-19 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 188 | 255 | 15.969549 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 17 | 150 | 13.33376 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_048570211.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum urartu] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HVT7 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology