Basic Information
Locus ID:
Pt_Chr0304870
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 159409140 | 159411289 | + | Pt_Chr0304870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 47,757.56 Da | 44.10 | 72.75 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00890 | Prefoldin | 140 | 256 | 0.00776272 | - |
| Pfam | PF00069 | Protein kinase domain | 302 | 428 | 7.5E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 307 | 429 | 4.91E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 292 | 429 | 2.5E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 429 | 15.623031 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 409 | 421 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 30 | - | - |
| Coils | Coil | Coil | 140 | 167 | - | - |
| Coils | Coil | Coil | 226 | 253 | - | - |
| Coils | Coil | Coil | 176 | 217 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07020.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_051214105.1 | U-box domain-containing protein 70-like [Lolium perenne] | 0 |
| TrEMBL | A0A0E0BLA6 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_039296 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304870 |